NS CPMG 2-site 3D full - Revision history

Bugman: Switch to the {{gna task url}} template to remove dead Gna! links.

2020-10-16T13:46:59Z

Switch to the {{gna task url}} template to remove dead Gna! links.

2017-10-27T12:17:33Z

Code: Switch to the {{relax url}} template for the library code URL.

2015-11-06T16:46:41Z

2015-11-03T13:41:10Z

Switched to parameter templates.

2015-10-15T14:14:16Z

Removed the =intro= sectioning for better page formatting and use in the 'Did you know...' section of the main page.

2014-11-26T13:09:59Z

Links: Updated the HTML manual link.

2014-09-11T07:59:33Z

Category link updates for the specific analyses.

2014-08-05T19:27:46Z

References

2014-05-03T23:11:40Z

Code

2014-05-03T22:38:01Z

References

@@ Line 13: / Line 13: @@
 The function uses an explicit matrix that contains relaxation, exchange and chemical shift terms.  It does the 180deg pulses in the CPMG train.  The approach of Bloch-McConnell can be found in chapter 3.1 of Palmer, A. G. Chem Rev 2004, 104, 3623-3640.  This function was written, initially in MATLAB, in 2010.
-This is the model of the numerical solution for the 2-site Bloch-McConnell equations.  It originates as optimization function number 1 from the fitting_main_kex.py script from Mathilde Lescanne, Paul Schanda, and Dominique Marion (see U{http://thread.gmane.org/gmane.science.nmr.relax.devel/4138}, U{https://gna.org/task/?7712#comment2} and U{https://gna.org/support/download.php?file_id=18262}).
+This is the model of the numerical solution for the 2-site Bloch-McConnell equations.  It originates as optimization function number 1 from the fitting_main_kex.py script from Mathilde Lescanne, Paul Schanda, and Dominique Marion (see U{http://thread.gmane.org/gmane.science.nmr.relax.devel/4138}, {{gna task url|7712|comment=2}} and U{https://gna.org/support/download.php?file_id=18262}).
 == Related models ==

@@ Line 7: / Line 7: @@
 == Code ==
-The library code.<br>
+The library code:  {{relax url|path=lib/dispersion/ns_cpmg_2site_3d.py}}
 == References ==

← Older revision		Revision as of 16:46, 6 November 2015
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	== See also ==		== See also ==
		+	[[Category:Models]]
		+	[[Category:Dispersion models]]
	[[Category:Relaxation dispersion analysis]]		[[Category:Relaxation dispersion analysis]]

@@ Line 3: / Line 3: @@
 == Parameters ==
-The NS CPMG 2-site 3D full model has the parameters {$R_{2A}^0$, $R_{2B}^0$, $...$, $p_A$, $\Delta\omega$, $k_{ex}$}.
+The NS CPMG 2-site 3D full model has the parameters {{{:R2Azero}}, {{:R2Bzero}}, ..., {{:pA}}, {{:Deltaomega}}, {{:kex}}}.
 == Code ==

← Older revision		Revision as of 14:14, 15 October 2015
Line 1:		Line 1:
−	~~= Intro =~~
	The relaxation dispersion model for the numeric solution (NS) to the Bloch-McConnell equations for [[SQ CPMG-type data]] using 3D magnetisation vectors. The model is labelled as '''NS CPMG 2-site 3D full''' in [[Relaxation dispersion citation for relax\|relax]].		The relaxation dispersion model for the numeric solution (NS) to the Bloch-McConnell equations for [[SQ CPMG-type data]] using 3D magnetisation vectors. The model is labelled as '''NS CPMG 2-site 3D full''' in [[Relaxation dispersion citation for relax\|relax]].

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 The [[Relaxation dispersion citation for relax|implementation of the NS CPMG 2-site 3D full model in relax]] can be seen in the:
-* [http://www.nmr-relax.com/manual/full_NS_2_site_3D_CPMG_model.html relax manual],
+* [http://www.nmr-relax.com/manual/The_full_NS_2_site_3D_CPMG_model.html relax manual],
 * [http://www.nmr-relax.com/api/3.1/lib.dispersion.ns_cpmg_2site_3d-module.html API documentation],
 * [http://www.nmr-relax.com/analyses/relaxation_dispersion.html#NS_CPMG_2-site_3D_full relaxation dispersion page of the relax website].

← Older revision		Revision as of 07:59, 11 September 2014
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	== See also ==		== See also ==
−	[[Category:~~Relaxation_dispersion~~]]	+	[[Category:Relaxation dispersion analysis]]

← Older revision		Revision as of 22:38, 3 May 2014
Line 5:		Line 5:

	The NS CPMG 2-site 3D full model has the parameters {$R_{2A}^0$, $R_{2B}^0$, $...$, $p_A$, $\Delta\omega$, $k_{ex}$}.		The NS CPMG 2-site 3D full model has the parameters {$R_{2A}^0$, $R_{2B}^0$, $...$, $p_A$, $\Delta\omega$, $k_{ex}$}.
		+
		+	== Code ==
		+
		+	The library code.<br>
		+	http://svn.gna.org/viewcvs/checkout/relax/trunk/lib/dispersion/ns_cpmg_2site_3d.py?revision=HEAD
		+

	== References ==		== References ==