NS CPMG 2-site expanded - Revision history

Bugman: Switch to the {{gna task link}} template to remove dead Gna! links.

2020-10-16T12:34:20Z

Switch to the {{gna task link}} template to remove dead Gna! links.

Bugman: /* Code */ Switch to the {{relax url}} template for the library code URL.

2017-10-27T12:19:32Z

Code: Switch to the {{relax url}} template for the library code URL.

Bugman: /* See also */ Added more categories.

2015-11-06T16:46:46Z

Bugman: /* References */ Switched to a labelled section transclusion for the citations.

2015-11-03T18:59:50Z

References: Switched to a labelled section transclusion for the citations.

Bugman: Switched to parameter templates.

2015-11-03T13:37:47Z

Switched to parameter templates.

Bugman: Removed the =intro= sectioning for better page formatting and use in the 'Did you know...' section of the main page.

2015-10-15T14:14:22Z

Removed the =intro= sectioning for better page formatting and use in the 'Did you know...' section of the main page.

Bugman: /* Code origin */ Better wiki markup.

2014-11-26T13:12:50Z

Code origin: Better wiki markup.

Bugman: /* Code origin */ Coverted the epydoc markup to wiki markup.

2014-11-26T13:11:56Z

Code origin: Coverted the epydoc markup to wiki markup.

Bugman: /* Links */ Updated the HTML manual link.

2014-11-26T13:10:18Z

Links: Updated the HTML manual link.

Bugman: Category link updates for the specific analyses.

2014-09-11T08:00:26Z

Category link updates for the specific analyses.

@@ Line 21: / Line 21: @@
 == Code origin ==
-The code originates as optimization function number 5 from the fitting_main_kex.py script from Mathilde Lescanne, Paul Schanda, and Dominique Marion (see the [http://thread.gmane.org/gmane.science.nmr.relax.devel/4138 mailing list discussion], the [https://gna.org/task/?7712#comment2 relax task with attached code] and the [https://gna.org/support/download.php?file_id=18262 file]).
+The code originates as optimization function number 5 from the fitting_main_kex.py script from Mathilde Lescanne, Paul Schanda, and Dominique Marion (see the [http://thread.gmane.org/gmane.science.nmr.relax.devel/4138 mailing list discussion], the {{gna task link|7712|comment=2|text=relax task with attached code}} and the [https://gna.org/support/download.php?file_id=18262 file]).
 Links to the copyright licensing agreements from all authors are:

@@ Line 11: / Line 11: @@
 == Code ==
-The library code.<br>
+The library code:  {{relax url|path=lib/dispersion/ns_cpmg_2site_expanded.py}}
 == Reference ==

← Older revision		Revision as of 16:46, 6 November 2015
Line 40:		Line 40:

	== See also ==		== See also ==
		+	[[Category:Models]]
		+	[[Category:Dispersion models]]
	[[Category:Relaxation dispersion analysis]]		[[Category:Relaxation dispersion analysis]]

@@ Line 18: / Line 18: @@
 The reference for the NS CPMG 2-site expanded model is:
-* Tollinger, M., Skrynnikov, N. R., Mulder, F. A. A., Forman-Kay, J. D., and Kay, L. E. (2001). Slow dynamics in folded and unfolded states of an sh3 domain. ''J. Am. Chem. Soc.'', '''123'''(46), 11341-11352. ([http://dx.doi.org/10.1021/ja011300z 10.1021/ja011300z]).
+* {{#lst:Citations|Tollinger01}}
 == Code origin ==

@@ Line 7: / Line 7: @@
 == Parameters ==
-The NS CPMG 2-site expanded model has the parameters {$R_2^0$, $...$, $p_A$, $\Delta\omega$, $k_{ex}$}.
+The NS CPMG 2-site expanded model has the parameters {{{:R2zero}}, ..., {{:pA}}, {{:Deltaomega}}, {{:kex}}}.
 == Code ==

← Older revision		Revision as of 14:14, 15 October 2015
Line 1:		Line 1:
−	~~= Intro =~~
	The relaxation dispersion model for the numeric solution (NS) to the Bloch-McConnell equations for [[SQ CPMG-type data]]. This uses the Maple expanded and fast equations from Nikolai Skrynnikov. The model is labelled as '''NS CPMG 2-site expanded''' in [[Relaxation dispersion citation for relax\|relax]].		The relaxation dispersion model for the numeric solution (NS) to the Bloch-McConnell equations for [[SQ CPMG-type data]]. This uses the Maple expanded and fast equations from Nikolai Skrynnikov. The model is labelled as '''NS CPMG 2-site expanded''' in [[Relaxation dispersion citation for relax\|relax]].

@@ Line 23: / Line 23: @@
 == Code origin ==
-The code originates as optimization function number 5 from the fitting_main_kex.py script from Mathilde Lescanne, Paul Schanda, and Dominique Marion (see U{http://thread.gmane.org/gmane.science.nmr.relax.devel/4138}, U{https://gna.org/task/?7712#comment2} and U{https://gna.org/support/download.php?file_id=18262}).
+The code originates as optimization function number 5 from the fitting_main_kex.py script from Mathilde Lescanne, Paul Schanda, and Dominique Marion (see [http://thread.gmane.org/gmane.science.nmr.relax.devel/4138], [https://gna.org/task/?7712#comment2] and [https://gna.org/support/download.php?file_id=18262]).
 Links to the copyright licensing agreements from all authors are:
-# Nikolai Skrynnikov, U{http://article.gmane.org/gmane.science.nmr.relax.devel/4279},
+* [http://article.gmane.org/gmane.science.nmr.relax.devel/4279 Nikolai Skrynnikov],
-# Martin Tollinger, U{http://article.gmane.org/gmane.science.nmr.relax.devel/4276},
+* [http://article.gmane.org/gmane.science.nmr.relax.devel/4276 Martin Tollinger],
-# Paul Schanda, U{http://article.gmane.org/gmane.science.nmr.relax.devel/4271},
+* [http://article.gmane.org/gmane.science.nmr.relax.devel/4271 Paul Schanda],
-# Mathilde Lescanne, U{http://article.gmane.org/gmane.science.nmr.relax.devel/4138},
+* [http://article.gmane.org/gmane.science.nmr.relax.devel/4138 Mathilde Lescanne],
-# Dominique Marion, U{http://article.gmane.org/gmane.science.nmr.relax.devel/4157}.
+* [http://article.gmane.org/gmane.science.nmr.relax.devel/4157 Dominique Marion].
 == Links ==

@@ Line 36: / Line 36: @@
 The [[Relaxation dispersion citation for relax|implementation of the NS CPMG 2-site expanded model in relax]] can be seen in the:
-* [http://www.nmr-relax.com/manual/NS_2_site_expanded_CPMG_model.html relax manual],
+* [http://www.nmr-relax.com/manual/The_NS_2_site_expanded_CPMG_model.html relax manual],
 * [http://www.nmr-relax.com/api/3.1/lib.dispersion.ns_cpmg_2site_expanded-module.html API documentation],
 * [http://www.nmr-relax.com/analyses/relaxation_dispersion.html#NS_CPMG_2-site_expanded relaxation dispersion page of the relax website].

← Older revision		Revision as of 08:00, 11 September 2014
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	== See also ==		== See also ==
−	[[Category:~~Relaxation_dispersion~~]]	+	[[Category:Relaxation dispersion analysis]]