Relax 1.2.13 - Revision history

Bugman: /* Links */ Fix the broken Gna! forum link by switching to {{gna link}}.

2020-10-13T22:08:12Z

Links: Fix the broken Gna! forum link by switching to {{gna link}}.

Bugman: Internal link to Modelfree4.

2015-12-15T16:15:51Z

Internal link to Modelfree4.

Bugman: /* References */ Removed a
tag.

2015-11-03T17:19:33Z

References: Removed a <section> tag.

Bugman: /* References */ Switched to a labelled section transclusion for the citations.

2015-11-03T17:19:10Z

References: Switched to a labelled section transclusion for the citations.

Bugman: Added the 'manual' parameter to {{infobox relax release}}.

2015-11-03T10:52:20Z

Added the 'manual' parameter to {{infobox relax release}}.

Bugman: Increased the sectioning depth.

2015-10-22T16:56:55Z

Increased the sectioning depth.

Bugman: Added an infobox.

2015-10-22T16:56:20Z

Added an infobox.

Bugman: /* See also */ Added a link to the API documentation.

2014-11-26T10:16:35Z

See also: Added a link to the API documentation.

Bugman: /* Bugfixes */ User function link fix.

2014-11-26T09:54:58Z

Bugfixes: User function link fix.

Bugman: Created a links section.

2014-09-21T15:13:15Z

Created a links section.

@@ Line 66: / Line 66: @@
 For reference, the following links are also part of the announcement for this release:
 * [http://wiki.nmr-relax.com/Relax_1.2.13 Official release notes]
-* [https://gna.org/forum/forum.php?forum_id=1872 Gna! news item]
+* {{gna link|url=gna.org/forum/forum.php?forum_id=1872|text=Gna! news item}}
 * [http://article.gmane.org/gmane.science.nmr.relax.announce/19 Gmane]
 * [http://www.mail-archive.com/relax-announce%40gna.org/msg00011.html Mail archive]

@@ Line 14: / Line 14: @@
 <section begin=description/>
-This release introduces new features and fixes a number of important bugs.  The most significant feature is the [http://www.nmr-relax.com/manual/Consistency_testing.html consistency testing of relaxation data from different field strengths] using the J(0), F<sub>&eta;</sub> and F<sub>R<sub>2</sub></sub> values [Morin and Gagné, 2009][Fushman et al., 1998].  Important bugs which have been fixed include the failure of Monte Carlo simulations when model-free model [[m0]] is encountered causing the parameter errors for all subsequent residues to be zero, the failure of reading of Art Palmer's Modelfree4 'mfout' file, and the handling of missing structural data.  For a full description of the additions and fixes, please see below.
+This release introduces new features and fixes a number of important bugs.  The most significant feature is the [http://www.nmr-relax.com/manual/Consistency_testing.html consistency testing of relaxation data from different field strengths] using the J(0), F<sub>&eta;</sub> and F<sub>R<sub>2</sub></sub> values [Morin and Gagné, 2009][Fushman et al., 1998].  Important bugs which have been fixed include the failure of Monte Carlo simulations when model-free model [[m0]] is encountered causing the parameter errors for all subsequent residues to be zero, the failure of reading of Art Palmer's [[Modelfree4]] 'mfout' file, and the handling of missing structural data.  For a full description of the additions and fixes, please see below.
 <section end=description/>
@@ Line 52: / Line 52: @@
 *  Initialisation of an empty diffusion tensor to the default values of zero now works.
 *  The default value of the I<sub>&infin;</sub> relaxation curve fitting parameter can now be set.
-*  Fix for the complete failure of the reading in of Art Palmer's Modelfree4 'mfout' results file ([https://gna.org/bugs/?8997 see bug #8997]).
+*  Fix for the complete failure of the reading in of Art Palmer's [[Modelfree4]] 'mfout' results file ([https://gna.org/bugs/?8997 see bug #8997]).
 *  Fix for a rare ZeroDivisionError during Monte Carlo simulations ([https://gna.org/bugs/?11004 see bug #11004]).
 *  relax no longer fails if XH bond vectors cannot be extracted from a PDB file ([https://gna.org/bugs/?11378 see bug #11378]).
 *  The [http://www.nmr-relax.com/manual/relax_data_display.html relax_data.display user function] no longer fails ([https://gna.org/bugs/?11383 see bug #11383]).
 *  The selection of model-free model [[m0]] causes Monte Carlo simulations to fail resulting in zero errors from that residue onwards ([https://gna.org/bugs/?11476 see bug #11476]).
-*  Another column fusion bug in Modelfree4's 'mfout' results file can be handled ([https://gna.org/bugs/?11483 see bug #11483]).
+*  Another column fusion bug in [[Modelfree4]]'s 'mfout' results file can be handled ([https://gna.org/bugs/?11483 see bug #11483]).
 *  Optimisation fix - the steady-state NOE value, gradient, and Hessian is now properly calculated when an order parameter of exactly 0.0 is encountered.
 <section end=bugfixes/>

@@ Line 83: / Line 83: @@
 * [*Fushman et al., 1998] {{#lst:Citations|Fushman98}}
 * [*Morin and Gagné, 2009] {{#lst:Citations|MorinGagné09}}
 <HarvardReferences />

@@ Line 79: / Line 79: @@
 == References ==
-<section start=references/>
+* [*d'Auvergne and Gooley, 2007] {{#lst:Citations|dAuvergneGooley07}}
-* [*d'Auvergne and Gooley, 2007] d'Auvergne, E. J. and Gooley, P. R. (2007).  Set theory formulation of the model-free problem and the diffusion seeded model-free paradigm.  ''Mol. BioSyst.'', '''3'''(7), 483-494. (DOI: [http://dx.doi.org/10.1039/b702202f 10.1039/b702202f]).
+* [*d'Auvergne and Gooley, 2008b] {{#lst:Citations|dAuvergneGooley08b}}
-* [*d'Auvergne and Gooley, 2008b] d'Auvergne, E. J. and Gooley, P. R. (2008).  Optimisation of NMR dynamic models II.  A new methodology for the dual optimisation of the model-free parameters and the Brownian rotational diffusion tensor.  ''J. Biomol. NMR'', '''40'''(2), 121-133. (DOI: [http://dx.doi.org/10.1007/s10858-007-9213-3 10.1007/s10858-007-9213-3]).
+* [*Fushman et al., 1998] {{#lst:Citations|Fushman98}}
-* [*Fushman et al., 1998] Fushman, D., Tjandra, N., and Cowburn, D. (1998).  Direct measurement of 15N chemical shift anisotropy in solution.  ''J. Am. Chem. Soc.'', '''120'''(42), 10947-10952. (DOI: [http://dx.doi.org/10.1021/ja981686m 10.1021/ja981686m]).
+* [*Morin and Gagné, 2009] {{#lst:Citations|MorinGagné09}}
 <section end=references/>
 <HarvardReferences />

@@ Line 8: / Line 8: @@
 | type     = Features and major bugfix
 | date     = 19 April 2008
 }}

@@ Line 10: / Line 10: @@
 }}
-= Description =
+== Description ==
 <section begin=description/>
@@ Line 16: / Line 16: @@
 <section end=description/>
-= Download =
+== Download ==
 <section begin=download/>
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 <section end=download/>
-= CHANGES file =
+== CHANGES file ==
 <section begin=metadata/>
@@ Line 30: / Line 30: @@
 <section end=metadata/>
-== Features ==
+=== Features ===
 <section begin=features/>
@@ Line 37: / Line 37: @@
 <section end=features/>
-== Changes ==
+=== Changes ===
 <section begin=changes/>
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 <section end=changes/>
-== Bugfixes ==
+=== Bugfixes ===
 <section begin=bugfixes/>
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 <section end=bugfixes/>
-= Links =
+== Links ==
 <section begin=links/>
@@ Line 72: / Line 72: @@
 <section end=links/>
-= Announcements =
+== Announcements ==
 {{:relax release announcements}}
-= References =
+== References ==
 <section start=references/>
@@ Line 86: / Line 86: @@
 <HarvardReferences />
-= See also =
+== See also ==
 * [http://www.nmr-relax.com/api/1.2/ The relax 1.2 API documentation]

← Older revision		Revision as of 16:56, 22 October 2015
Line 1:		Line 1:
	{{lowercase title}}		{{lowercase title}}
		+
		+	{{infobox relax release
		+	\| version = 1.2.13
		+	\| prev = 1.2.12
		+	\| next = 1.2.14
		+	\| keywords = Consistency testing of relaxation data
		+	\| type = Features and major bugfix
		+	\| date = 19 April 2008
		+	}}

	= Description =		= Description =

@@ Line 79: / Line 79: @@
 = See also =
 {{:relax release see also}}
 [[Category:Consistency testing analysis]]
 [[Category:Model-free analysis]]