Relax 1.3.2 - Revision history

Bugman: /* Links */ Fix the broken Gna! forum link by switching to {{gna link}}.

2020-10-14T12:49:59Z

Links: Fix the broken Gna! forum link by switching to {{gna link}}.

Bugman: /* Bugfixes */

2020-10-06T16:34:36Z

Bugfixes

Bugman: /* Bugfixes */ Switch to the {{gna bug link}} template to fix the broken links.

2020-10-06T16:33:53Z

Bugfixes: Switch to the {{gna bug link}} template to fix the broken links.

Bugman: /* References */ Switched to a labelled section transclusion for the citations.

2015-11-03T17:16:04Z

References: Switched to a labelled section transclusion for the citations.

Bugman: Added the 'manual' parameter to {{infobox relax release}}.

2015-10-22T14:04:18Z

Added the 'manual' parameter to {{infobox relax release}}.

Bugman: Added an infobox.

2015-10-21T19:58:46Z

Added an infobox.

Bugman: Increased the sectioning depth.

2015-10-21T19:57:38Z

Increased the sectioning depth.

Bugman: /* See also */ Added a link to the API documentation.

2014-11-26T10:23:27Z

See also: Added a link to the API documentation.

Bugman: Created a links section.

2014-09-20T18:10:57Z

Created a links section.

Bugman: relax release notes links.

2014-09-20T18:08:51Z

relax release notes links.

@@ Line 71: / Line 71: @@
 For reference, the following links are also part of the announcement for this release:
 * [http://wiki.nmr-relax.com/Relax_1.3.2 Official release notes]
-* [https://gna.org/forum/forum.php?forum_id=1973 Gna! news item]
+* {{gna link|url=gna.org/forum/forum.php?forum_id=1973|text=Gna! news item}}
 * [http://article.gmane.org/gmane.science.nmr.relax.announce/22 Gmane]
 * [http://www.mail-archive.com/relax-announce%40gna.org/msg00014.html Mail archive]

@@ Line 60: / Line 60: @@
 *  Fix for the duplication of sequence data during model selection.
 *  Monte Carlo simulations were failing due to a missing sequence error ({{gna bug link|12410}}).
-*  The model elimination error "AttributeError: 'SpinContainer' object has no attribute 'params'." has been fixed ([{{gna bug link|12411}}).
+*  The model elimination error "AttributeError: 'SpinContainer' object has no attribute 'params'." has been fixed ({{gna bug link|12411}}).
 *  A missing global chi-squared value was causing failure of global model selection ({{gna bug link|12412}}).
 *  Monte Carlo simulation elimination was removing the simulation not from the affected spin but from all spins ({{gna bug link|12416}}).

@@ Line 52: / Line 52: @@
 *  Fixed the reading of relax 1.2 model-free results files (identified by the relax data store abstraction).
 *  Various PDB file loading issues fixed.
-*  [http://www.nmr-relax.com/manual/value_set.html value.set] no longer fails when the parameter being set already exists ([https://gna.org/bugs/?12406 bug #12406]).
+*  [http://www.nmr-relax.com/manual/value_set.html value.set] no longer fails when the parameter being set already exists ({{gna bug link|12406}}).
-*  Fix for the bug whereby model elimination does nothing for model-free models.  This fix may solve other model-free related issues ([https://gna.org/bugs/?12407 bug #12407]).
+*  Fix for the bug whereby model elimination does nothing for model-free models.  This fix may solve other model-free related issues ({{gna bug link|12407}}).
-*  Model elimination no longer fails when no diffusion tensor is loaded ([https://gna.org/bugs/?12408 bug #12408]).
+*  Model elimination no longer fails when no diffusion tensor is loaded ({{gna bug link|12408}}).
-*  The error when loading the PDB file through the reading of the results file in the 'final' stage of the 'full_analysis.py' sample script is fixed ([https://gna.org/bugs/? 1240 bug # 9).
+*  The error when loading the PDB file through the reading of the results file in the 'final' stage of the 'full_analysis.py' sample script is fixed ({{gna bug link|12409}}).
 *  Model elimination is fixed in the 'full_analysis.py' script.
 *  The [http://www.nmr-relax.com/manual/fix.html fix user function] works again when the element argument is set to 'all'.
 *  Fix for the duplication of sequence data during model selection.
-*  Monte Carlo simulations were failing due to a missing sequence error ([https://gna.org/bugs/?12410 bug #12410]).
+*  Monte Carlo simulations were failing due to a missing sequence error ({{gna bug link|12410}}).
-*  The model elimination error "AttributeError: 'SpinContainer' object has no attribute 'params'." has been fixed ([https://gna.org/bugs/?12411 bug #12411]).
+*  The model elimination error "AttributeError: 'SpinContainer' object has no attribute 'params'." has been fixed ([{{gna bug link|12411}}).
-*  A missing global chi-squared value was causing failure of global model selection ([https://gna.org/bugs/?12412 bug #12412]).
+*  A missing global chi-squared value was causing failure of global model selection ({{gna bug link|12412}}).
-*  Monte Carlo simulation elimination was removing the simulation not from the affected spin but from all spins ([https://gna.org/bugs/?12416 bug #12416]).
+*  Monte Carlo simulation elimination was removing the simulation not from the affected spin but from all spins ({{gna bug link|12416}}).
-*  Fix for the failure of the [http://www.nmr-relax.com/manual/value_write.html value.write user function] in all analysis types ([https://gna.org/bugs/?12418 bug #12418]).
+*  Fix for the failure of the [http://www.nmr-relax.com/manual/value_write.html value.write user function] in all analysis types ({{gna bug link|12418}}).
 <section end=bugfixes/>

@@ Line 84: / Line 84: @@
 == References ==
-<section start=references/>
+* [*d'Auvergne and Gooley, 2007] {{#lst:Citations|dAuvergneGooley07}}
-* [*d'Auvergne and Gooley, 2007] d'Auvergne, E. J. and Gooley, P. R. (2007).  Set theory formulation of the model-free problem and the diffusion seeded model-free paradigm.  ''Mol. BioSyst.'', '''3'''(7), 483–494. (DOI: [http://dx.doi.org/10.1039/b702202f 10.1039/b702202f]).
+* [*d'Auvergne and Gooley, 2008b] {{#lst:Citations|dAuvergneGooley08b}}
 <HarvardReferences />

@@ Line 8: / Line 8: @@
 | type     = Major bugfix
 | date     = 8 October 2008
 }}

← Older revision		Revision as of 19:58, 21 October 2015
Line 1:		Line 1:
	{{lowercase title}}		{{lowercase title}}
		+
		+	{{infobox relax release
		+	\| version = 1.3.2
		+	\| prev = 1.3.1
		+	\| next = 1.3.3
		+	\| keywords = Model-free analysis, NOE analysis
		+	\| type = Major bugfix
		+	\| date = 8 October 2008
		+	}}

	== Description ==		== Description ==

@@ Line 1: / Line 1: @@
 {{lowercase title}}
-= Description =
+== Description ==
 <section begin=description/>
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-= Download =
+== Download ==
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 <section end=download/>
-= CHANGES file =
+== CHANGES file ==
 <section begin=metadata/>
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-== Features ==
+=== Features ===
 <section begin=features/>
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 <section end=features/>
-== Changes ==
+=== Changes ===
 <section begin=changes/>
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 <section end=changes/>
-== Bugfixes ==
+=== Bugfixes ===
 <section begin=bugfixes/>
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 <section end=bugfixes/>
-= Links =
+== Links ==
 <section begin=links/>
@@ Line 68: / Line 68: @@
 <section end=links/>
-= Announcements =
+== Announcements ==
 {{:relax release announcements}}
-= References =
+== References ==
 <section start=references/>
@@ Line 80: / Line 80: @@
 <HarvardReferences />
-= See also =
+== See also ==
 * [http://www.nmr-relax.com/api/1.3/ The relax 1.3 API documentation]
 {{:relax release see also}}
 [[Category:Model-free analysis]]

@@ Line 4: / Line 4: @@
 <section begin=description/>
-This release solves many major bugs in the final stages of model-free analysis, especially when using the 'full_analysis.py' script [d'Auvergne and Gooley, 2007][d'Auvergne and Gooley, 2008b].  This version also marks the return of the NOE analysis.  If you are using [[relax 1.3.1|relax version 1.3.1]], it is recommended that you upgrade to 1.3.2.  Bugs which have been resolved include: problems reading PDB files; failure of the [http://www.nmr-relax.com/manual/value_set.html value.set], [http://www.nmr-relax.com/manual/fix.html fix] and [http://www.nmr-relax.com/manual/value_write.html value.write] user functions; non-functional [http://www.nmr-relax.com/manual/eliminate.html model elimination]; model selection issues in certain situations; and various Monte Carlo simulation issues.
+This release solves many major bugs in the final stages of model-free analysis, especially when using the 'full_analysis.py' script [d'Auvergne and Gooley, 2007][d'Auvergne and Gooley, 2008b].  This version also marks the return of the NOE analysis.  If you are using [[relax 1.3.1|relax version 1.3.1]], it is recommended that you upgrade to [[relax 1.3.2|1.3.2]].  Bugs which have been resolved include: problems reading PDB files; failure of the [http://www.nmr-relax.com/manual/value_set.html value.set], [http://www.nmr-relax.com/manual/fix.html fix] and [http://www.nmr-relax.com/manual/value_write.html value.write] user functions; non-functional [http://www.nmr-relax.com/manual/eliminate.html model elimination]; model selection issues in certain situations; and various Monte Carlo simulation issues.
 <section end=description/>