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Manual

4,430 bytes added, 17:29, 19 October 2015
Added an intro sentence, and increased the depth of the sectioning.
The following is information about the relax manual. == See Find the manual ==
The homepage manual
* html http://www.nmr-relax.com/manual/index.html
* pdf http://download.gna.org/relax/manual/relax.pdf
* Latest builded built manual http://download.gna.org/relax/manual == Get help ==The help section in relax is the best you can get ! Just start relax in terminal:<source lang="python">> relax # Then write, to see options which is related to relax_disp.relax> help(relax_disp) For example:help(relax_disp.select_model)# You can find more info at the wiki: http://wiki.nmr-relax.com/Category:Relaxation_dispersion# Here you can find link to the online HTML manual, and the API documentation. # You may want to read:relax> help(relax_disp.exp_type)relax> help(spectrum)relax> help(spectrum.replicated)relax> help(spectrum.baseplane_rmsd)relax> help(spectrometer) # This a very very fast an useful method to quickly understand the functions. # If you are unsure how to find where each method function is put, start the GUI.# In the top menu, go through the settings.# They are ordered the same way. ! :-) # For example.relax> help(grid_search)</source> == Write to the mail lists to get personal help ==See the wiki page [[Mailing_archives | Mailing archives]], to read how to sign up and write to the mail archives. == Build the manual ===== Latex requirements ===The '''html.sty''' is needed from the latex package [http://www.ctan.org/pkg/latex2html latex2html].  A [http://miktex.org/ windows MiKTeX installation] should fetch it automatically. When compiling the pdf latex manual, only '''html.sty''' is needed. The easiest is just to placethat in your LaTeX installation. [http://en.wikibooks.org/wiki/LaTeX/Installing_Extra_Packages See this guide].<source lang="bash">cd $HOME/Downloads ;wget http://mirrors.ctan.org/support/latex2html/latex2html-2012.tgz ;tar -xzf latex2html-2012.tgz ;rm latex2html-2012.tgz ;cd `where latex | xargs dirname` cd ../../texmf-local/tex/latex# ORcd ../../texmf-dist/tex/latex cp -r /$HOME/Downloads/latex2html-2012/texinputs latex2html# Then update latex indextexhash</source>For a complete build of latex2html in linux, you could do something like this installation. But this is only for the building of '''user_manual_html'''. It is now advised to do this normally.<source lang="bash">sudo yum install latex2html OR cd $HOME/Downloads ;wget http://www.latex2html.org/~latex2ht/current/latex2html-2012.tar.gz ;tar -xzf latex2html-2012.tar.gz ;rm latex2html-2012.tar.gz ;cd latex2html-2012 ;mkdir build ;./configure --help./configure#Or make a custom build./configure --prefix=$PWD/buildmake</source> === Build pdf manual ===The manual ends up in '''docs/relax.pdf''' Go to the relax base directory.<br>Then issue the command scons user_manual_pdf This triggers a range of functions, which create some files. If they do not need to be updated, following compilation canbe performed much faster with scons user_manual_pdf_nofetch === Build html manual ===This needs quite some time to figure out to install and run latex2html. Go to the relax base directory.<br>Then issue the command scons user_manual_htmlAnd faster scons user_manual_html_nofetch == Build API (Application programming interface) documentation ==The html documentation ends up in '''docs/api/''' === Epydoc python package installation ======= Windows epydoc ====First: Download this packages, do not unpack them yet.* epydoc http://www.lfd.uci.edu/~gohlke/pythonlibs/#epydoc'''take the win32 bit versions.''' Open WinPython Control Panel, and drag the .exe into the window. Install graphviz Windows binaries from http://www.graphviz.org.<br>Remember to add the binaries to your path.<source lang="powershell">set PATH=%PATH%;C:\Program Files (x86)\Graphviz2.32\bin</source> ==== Linux ==== sudo yum install epydoc sudo yum install graphviz-python === Build API ===The API ends up in docs/api/index.html You need to run 'scons clean' first to remove the *.pyc files and any other temporary files. scons clean Build the API documentation scons api_manual_html === Regarding error messages ===The "No documentation available!" errors are normal as these are for non-python files which are not part of relax. It's safe to ignore these. The wxPython indentation errors are also fine. epydoc is scanning the wx module docstrings, but it cannot be stopped.
The "Unable to render Graphviz dot graph" are because the Graphviz software is not available.<br>
Windows binaries are available though (http://www.graphviz.org).
== See also ==
[[Category:FAQ]]
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