Difference between revisions of "NS MMQ 3-site"
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| − | + | The 3-site relaxation dispersion model for the numeric solution (NS) to the Bloch-McConnell equations for [[:Category:MMQ CPMG data|MMQ CPMG-type data]] whereby the simplification {{:R2Azero}} = {{:R2Bzero}} = {{:R2Czero}} is assumed. | |
| − | The 3-site relaxation dispersion model for the numeric solution (NS) to the Bloch-McConnell equations for [[:Category:MMQ CPMG data|MMQ CPMG-type data]] whereby the simplification | ||
== Parameters == | == Parameters == | ||
| − | The NS MMQ 3-site model has the parameters { | + | The NS MMQ 3-site model has the parameters {{{:R2zero}}, ..., {{:pA}}, {{:pB}}, {{:DeltaomegaAB}}, {{:DeltaomegaBC}}, {{:DeltaomegaHAB}}, {{:DeltaomegaHBC}}, {{:kexAB}}, {{:kexBC}}, {{:kexAC}}}. |
== Reference == | == Reference == | ||
| Line 10: | Line 9: | ||
The references for the NS MMQ 3-site model are: | The references for the NS MMQ 3-site model are: | ||
| − | * | + | * {{#lst:Citations|Korzhnev04a}} |
| − | * | + | |
| − | * | + | * {{#lst:Citations|Korzhnev04b}} |
| + | |||
| + | * {{#lst:Citations|Korzhnev05a}} | ||
== Links == | == Links == | ||
The [[Relaxation dispersion citation for relax|implementation of the NS MMQ 3-site model in relax]] can be seen in the: | The [[Relaxation dispersion citation for relax|implementation of the NS MMQ 3-site model in relax]] can be seen in the: | ||
| − | * [http://www.nmr-relax.com/manual/ | + | * [http://www.nmr-relax.com/manual/The_NS_MMQ_3_site_model.html relax manual], |
* [http://www.nmr-relax.com/api/3.1/lib.dispersion.ns_mmq_3site-module.html API documentation], | * [http://www.nmr-relax.com/api/3.1/lib.dispersion.ns_mmq_3site-module.html API documentation], | ||
* [http://www.nmr-relax.com/analyses/relaxation_dispersion.html#NS_MMQ_3-site relaxation dispersion page of the relax website]. | * [http://www.nmr-relax.com/analyses/relaxation_dispersion.html#NS_MMQ_3-site relaxation dispersion page of the relax website]. | ||
== See also == | == See also == | ||
| + | [[Category:Models]] | ||
| + | [[Category:Dispersion models]] | ||
[[Category:MMQ CPMG data]] | [[Category:MMQ CPMG data]] | ||
[[Category:Relaxation dispersion analysis]] | [[Category:Relaxation dispersion analysis]] | ||
Latest revision as of 16:47, 6 November 2015
The 3-site relaxation dispersion model for the numeric solution (NS) to the Bloch-McConnell equations for MMQ CPMG-type data whereby the simplification R2A0 = R2B0 = R2C0 is assumed.
Contents
Parameters
The NS MMQ 3-site model has the parameters {R20, ..., pA, pB, ΔωAB, ΔωBC, ΔωHAB, ΔωHBC, kexAB, kexBC, kexAC}.
Reference
The references for the NS MMQ 3-site model are:
- Korzhnev, D. M., Kloiber, K., Kanelis, V., Tugarinov, V., and Kay, L. E. (2004). Probing slow dynamics in high molecular weight proteins by methyl-TROSY NMR spectroscopy: application to a 723-residue enzyme. J. Am. Chem. Soc., 126(12), 3964-3973. (DOI: 10.1021/ja039587i)
- Korzhnev, D. M., Kloiber, K., and Kay, L. E. (2004). Multiple-quantum relaxation dispersion NMR spectroscopy probing millisecond time-scale dynamics in proteins: theory and application. J. Am. Chem. Soc., 126(23), 7320-7329. (DOI: 10.1021/ja049968b)
- Korzhnev, D. M., Neudecker, P., Mittermaier, A., Orekhov, V. Y., and Kay, L. E. (2005). Multiple-site exchange in proteins studied with a suite of six NMR relaxation dispersion experiments: an application to the folding of a Fyn SH3 domain mutant. J. Am. Chem. Soc., 127(44), 15602-15611. (DOI: 10.1021/ja054550e)
Links
The implementation of the NS MMQ 3-site model in relax can be seen in the:
