Difference between revisions of "User:Troels Emtekær Linnet"

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Troels Emtekær Linnet
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PhD student
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Copenhagen University
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SBiNLab
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== Tests ==
 
[[File:Example.jpg|80px|link=http://www.wikipedia.org]]
 
[[File:Example.jpg|80px|link=http://www.wikipedia.org]]
 
[[File:Example.jpg|80px|link=MediaWiki]]
 
[[File:Example.jpg|80px|link=MediaWiki]]
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<div class="imagelink_screenshots_small">[[start.png|&nbsp;]]</div>
 
<div class="imagelink_screenshots_small">[[start.png|&nbsp;]]</div>
  
== Test ==
 
 
<include src="https://raw.github.com/Pymol-Scripts/Pymol-script-repo/master/cyspka.py" />
 
<include src="https://raw.github.com/Pymol-Scripts/Pymol-script-repo/master/cyspka.py" />
  
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<include src="http://www.ietf.org/rfc/rfc1945" />
 
<include src="http://www.ietf.org/rfc/rfc1945" />
  
== Test 3 ==
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== Test DPL imagecontainer=Screenshots ==
 
<DPL>
 
<DPL>
 
imagecontainer=Screenshots
 
imagecontainer=Screenshots
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  seriesTab -in peaks.dat
 
  seriesTab -in peaks.dat
 
  seriesTab -in ../../peaks.dat -out allplanes_coMDD_ser.ser -list allplanes_coMDD.list
 
  seriesTab -in ../../peaks.dat -out allplanes_coMDD_ser.ser -list allplanes_coMDD.list
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== Test randomimagebycategor ==
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<randomimagebycategory width="200" categories="Screenshots"/>
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== Test ==
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<source lang="python">
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from math import pi
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from lib import nmr
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from lib.physical_constants import return_gyromagnetic_ratio
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id = 'test'
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H_frq = 900.0e6
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B0_tesla =  H_frq / return_gyromagnetic_ratio(nucleus='1H') * 2.0 * pi
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print "B0 in Tesla:", B0_tesla
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isotope = '15N'
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yOBS_N15_rad_s = return_gyromagnetic_ratio(nucleus=isotope) * B0_tesla
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yOBS_N15_ppm = nmr.frequency_to_ppm_from_rad(frq=yOBS_N15_rad_s, B0=H_frq, isotope=isotope)
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print yOBS_N15_ppm
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# Convert hz
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offset_hz = 2100.
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offset_ppm = nmr.frequency_to_ppm(frq=offset_hz, B0=H_frq, isotope=isotope)
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print offset_ppm
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#yOBS_rad_s = return_gyromagnetic_ratio(nucleus=isotope) * B0_tesla
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#print yOBS_rad_s
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#yOBS_ppm = nmr.frequency_to_ppm_from_rad(frq=yOBS_rad_s, B0=H_frq, isotope=isotope)
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#print yOBS_ppm
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 +
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# Center carriage In ppm
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yCAR_ppm = 118.078
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</source>

Latest revision as of 15:59, 28 November 2015

Troels Emtekær Linnet PhD student Copenhagen University SBiNLab

Tests

80px 80px

<include src="https://raw.github.com/Pymol-Scripts/Pymol-script-repo/master/cyspka.py" />

Test2

<include src="http://www.ietf.org/rfc/rfc1945" />

Test DPL imagecontainer=Screenshots

[[%PAGE%|thumb|185px|A random relax screenshot. See Screenshots.]]


SeriesTab

ls -v -d -1 */*.ft2 > allplanes.list
cd analysis_FT/int_corr_ft_method_all_awk/coMDD
seriesTab -in peaks.dat
seriesTab -in ../../peaks.dat -out allplanes_coMDD_ser.ser -list allplanes_coMDD.list

Test randomimagebycategor


Test

from math import pi
from lib import nmr
from lib.physical_constants import return_gyromagnetic_ratio


id = 'test'
H_frq = 900.0e6
B0_tesla =  H_frq / return_gyromagnetic_ratio(nucleus='1H') * 2.0 * pi
print "B0 in Tesla:", B0_tesla
isotope = '15N'

yOBS_N15_rad_s = return_gyromagnetic_ratio(nucleus=isotope) * B0_tesla
yOBS_N15_ppm = nmr.frequency_to_ppm_from_rad(frq=yOBS_N15_rad_s, B0=H_frq, isotope=isotope)

print yOBS_N15_ppm

# Convert hz
offset_hz = 2100.
offset_ppm = nmr.frequency_to_ppm(frq=offset_hz, B0=H_frq, isotope=isotope)
print offset_ppm


#yOBS_rad_s = return_gyromagnetic_ratio(nucleus=isotope) * B0_tesla
#print yOBS_rad_s
#yOBS_ppm = nmr.frequency_to_ppm_from_rad(frq=yOBS_rad_s, B0=H_frq, isotope=isotope)
#print yOBS_ppm


# Center carriage In ppm
yCAR_ppm = 118.078