Difference between revisions of "Relax 3.1.2"
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{{lowercase title}} | {{lowercase title}} | ||
| − | = | + | {{infobox relax release |
| + | | version = 3.1.2 | ||
| + | | prev = 3.1.1 | ||
| + | | next = 3.1.3 | ||
| + | | keywords = Icons, spectrometer frequency | ||
| + | | type = Minor bugfix | ||
| + | | date = 13 January 2014 | ||
| + | | manual = yes | ||
| + | }} | ||
| − | < | + | == Description == |
| + | |||
| + | <section begin=description/> | ||
This relax version is a minor bugfix release which repairs a number of icons on newer operating systems and a solves a problem caused by accidentally setting an incorrect spectrometer frequency. | This relax version is a minor bugfix release which repairs a number of icons on newer operating systems and a solves a problem caused by accidentally setting an incorrect spectrometer frequency. | ||
| − | </ | + | <section end=description/> |
| − | = Download = | + | == Download == |
| + | <section begin=download/> | ||
The new relax versions can be downloaded from http://www.nmr-relax.com/download.html. If binary distributions are not yet available for your platform and you manage to compile the binary modules, please consider contributing these to the relax project (described in section 3.6 of the relax manual, http://www.nmr-relax.com/manual/relax_distribution_archives.html). | The new relax versions can be downloaded from http://www.nmr-relax.com/download.html. If binary distributions are not yet available for your platform and you manage to compile the binary modules, please consider contributing these to the relax project (described in section 3.6 of the relax manual, http://www.nmr-relax.com/manual/relax_distribution_archives.html). | ||
| + | <section end=download/> | ||
| + | == CHANGES file == | ||
| − | = | + | <section begin=metadata/> |
| − | + | Version 3.1.2 <br/> | |
| − | Version 3.1.2 | + | (13 January 2014, from /trunk) <br/> |
| − | (13 January 2014, from /trunk) | ||
http://svn.gna.org/svn/relax/tags/3.1.2 | http://svn.gna.org/svn/relax/tags/3.1.2 | ||
| + | <section end=metadata/> | ||
| − | == Features == | + | === Features === |
| + | <section begin=features/> | ||
N/A | N/A | ||
| + | <section end=features/> | ||
| + | === Changes === | ||
| − | = | + | <section begin=changes/> |
| − | + | * The average_intensity() dispersion function now accepts the offset argument. This is for better support of combined offset and spin-lock varied R<sub>1ρ</sub>-type data. The argument is then passed into the find_intensity_keys() function. | |
| − | * The average_intensity() dispersion function now accepts the offset argument. This is for better support of combined offset and spin-lock varied | + | * Improved the [[DPL94|DPL94 dispersion model]] [http://www.nmr-relax.com/manual/DPL94_2_site_fast_exchange_R1_model.html description in the manual]. |
| − | * Improved the DPL94 dispersion model description in the manual. | ||
* Copied a Sparky peak list to be modified to be a Sparky file without intensity column. | * Copied a Sparky peak list to be modified to be a Sparky file without intensity column. | ||
* Modified the Sparky file to have no columns with intensity values. | * Modified the Sparky file to have no columns with intensity values. | ||
| − | * Implemented to read spins from a SPARKY list, when no intensity column is present. Addition to | + | * Implemented to read spins from a SPARKY list, when no intensity column is present. Addition to [https://gna.org/support/?3044 Support Request #3044 - load spins from Sparky list]. |
| − | * Created the Relax_disp.test_bug_21460_disp_cluster_fail system test. This is to catch | + | * Created the Relax_disp.test_bug_21460_disp_cluster_fail system test. This is to catch [https://gna.org/bugs/?21460 bug #21460] reported by Min-Kyu Cho. The save file added to the repository consists solely of the data for the first residue. |
* Speed ups for the Relax_disp.test_bug_21460_disp_cluster_fail system test. The optimisation precision is not important for demonstrating this bug. | * Speed ups for the Relax_disp.test_bug_21460_disp_cluster_fail system test. The optimisation precision is not important for demonstrating this bug. | ||
* Updated the main copyright notice for 2014. | * Updated the main copyright notice for 2014. | ||
| Line 37: | Line 52: | ||
* Updated the copyright for the relax GUI splash screen for 2014. | * Updated the copyright for the relax GUI splash screen for 2014. | ||
* Improvement for the relax test suite printout with the --time command line argument flag. The tests printed out now have the package and module names removed, so that one the test name remains. This removes a large amount of text, simplifying the printout. | * Improvement for the relax test suite printout with the --time command line argument flag. The tests printed out now have the package and module names removed, so that one the test name remains. This removes a large amount of text, simplifying the printout. | ||
| + | <section end=changes/> | ||
| + | === Bugfixes === | ||
| − | == | + | <section begin=bugfixes/> |
| + | * Partial fix for [https://gna.org/bugs/?21338 bug #21338 - the bad sRGB profile in some PNGs]. This is only partial as some files are still to be converted (the original Bruker logo, and the 16x16, 22x22 and 32x32 sized Bruker icons). | ||
| + | * Fix for [https://gna.org/bugs/?21460 bug #21460, the failure of relaxation dispersion due to incorrect spectrometer information], as reported by Min-Kyu Cho. There was only one place in the dispersion analysis which failed due to a spectrometer frequency not containing any relaxation data - in the insignificance testing in the auto-analysis. | ||
| + | * Loosened the chi2 check in the Relax_disp.test_korzhnev_2005_15n_mq_data system test. This is to allow the test to pass on a 32-bit Linux (Mageia 1) test system. | ||
| + | <section end=bugfixes/> | ||
| − | + | == Links == | |
| − | |||
| − | |||
| + | <section begin=links/> | ||
| + | For reference, the following links are also part of the announcement for this release: | ||
| + | * [http://wiki.nmr-relax.com/Relax_3.1.2 Official release notes] | ||
| + | * {{gna link|url=gna.org/forum/forum.php?forum_id=2427|text=Gna! news item}} | ||
| + | * [http://article.gmane.org/gmane.science.nmr.relax.announce/48 Gmane] | ||
| + | * [http://www.mail-archive.com/relax-announce%40gna.org/msg00042.html Mail Archive] | ||
| + | * [https://mail.gna.org/public/relax-announce/2014-01/msg00000.html Local archives] | ||
| + | * [http://marc.info/?l=relax-announce&m=138964924912469&w=2 MARC] | ||
| + | <section end=links/> | ||
| − | = Announcements = | + | == Announcements == |
{{:relax release announcements}} | {{:relax release announcements}} | ||
| − | = See also = | + | == See also == |
| − | [ | + | * [http://www.nmr-relax.com/api/3.1/ The relax 3.1 API documentation] |
| + | {{:relax release see also}} | ||
Latest revision as of 22:25, 13 October 2020
 | |||||
| relax version 3.1.2 | |||||
| |||||
| Keywords | Icons, spectrometer frequency | ||||
|---|---|---|---|---|---|
| Release type | Minor bugfix | ||||
| Release date | 13 January 2014 | ||||
|
| |||||
 The relax 3.1.2 user manual | |||||
Contents
Description
This relax version is a minor bugfix release which repairs a number of icons on newer operating systems and a solves a problem caused by accidentally setting an incorrect spectrometer frequency.
Download
The new relax versions can be downloaded from http://www.nmr-relax.com/download.html. If binary distributions are not yet available for your platform and you manage to compile the binary modules, please consider contributing these to the relax project (described in section 3.6 of the relax manual, http://www.nmr-relax.com/manual/relax_distribution_archives.html).
CHANGES file
Version 3.1.2
(13 January 2014, from /trunk)
http://svn.gna.org/svn/relax/tags/3.1.2
Features
N/A
Changes
- The average_intensity() dispersion function now accepts the offset argument. This is for better support of combined offset and spin-lock varied R1ρ-type data. The argument is then passed into the find_intensity_keys() function.
- Improved the DPL94 dispersion model description in the manual.
- Copied a Sparky peak list to be modified to be a Sparky file without intensity column.
- Modified the Sparky file to have no columns with intensity values.
- Implemented to read spins from a SPARKY list, when no intensity column is present. Addition to Support Request #3044 - load spins from Sparky list.
- Created the Relax_disp.test_bug_21460_disp_cluster_fail system test. This is to catch bug #21460 reported by Min-Kyu Cho. The save file added to the repository consists solely of the data for the first residue.
- Speed ups for the Relax_disp.test_bug_21460_disp_cluster_fail system test. The optimisation precision is not important for demonstrating this bug.
- Updated the main copyright notice for 2014.
- Fix for the main copyright notice.
- Updated the copyright notice visible to the user to 2014.
- Updated the copyright for the relax GUI splash screen for 2014.
- Improvement for the relax test suite printout with the --time command line argument flag. The tests printed out now have the package and module names removed, so that one the test name remains. This removes a large amount of text, simplifying the printout.
Bugfixes
- Partial fix for bug #21338 - the bad sRGB profile in some PNGs. This is only partial as some files are still to be converted (the original Bruker logo, and the 16x16, 22x22 and 32x32 sized Bruker icons).
- Fix for bug #21460, the failure of relaxation dispersion due to incorrect spectrometer information, as reported by Min-Kyu Cho. There was only one place in the dispersion analysis which failed due to a spectrometer frequency not containing any relaxation data - in the insignificance testing in the auto-analysis.
- Loosened the chi2 check in the Relax_disp.test_korzhnev_2005_15n_mq_data system test. This is to allow the test to pass on a 32-bit Linux (Mageia 1) test system.
Links
For reference, the following links are also part of the announcement for this release:
Announcements
If you would like to receive announcements about new relax versions, please subscribe to the relax announcement mailing list. This list only receives ~10 emails per year. It is archived at the SourceForge archives and in The Mail Archive.
See also
- The combined release notes for all relax versions (warning, this is very large).
- The combined release descriptions for all relax versions.
- The combined release metadata for all relax versions.
- The combined release features for all relax versions.
- The combined release changes for all relax versions (warning, this is very large).
- The combined release bugfixes for all relax versions.
- The combined release announcement links for all relax versions.
