Difference between revisions of "NS MMQ 3-site linear"
Jump to navigation
Jump to search
(Removed the =intro= sectioning for better page formatting and use in the 'Did you know...' section of the main page.) |
(Switched to parameter templates.) |
||
Line 1: | Line 1: | ||
− | The 3-site relaxation dispersion model for the numeric solution (NS) to the Bloch-McConnell equations for [[:Category:MMQ CPMG data|MMQ CPMG-type data]] linearised with | + | The 3-site relaxation dispersion model for the numeric solution (NS) to the Bloch-McConnell equations for [[:Category:MMQ CPMG data|MMQ CPMG-type data]] linearised with {{:kAC}} = {{:kCA}} = 0 whereby the simplification {{:R2Azero}} = {{:R2Bzero}} = {{:R2Czero}} is assumed. |
== Parameters == | == Parameters == | ||
− | The NS MMQ 3-site linear model has the parameters { | + | The NS MMQ 3-site linear model has the parameters {{{:R2zero}}, ..., {{:pA}}, {{:pB}}, {{:DeltaomegaAB}}, {{:DeltaomegaBC}}, {{:DeltaomegaHAB}}, {{:DeltaomegaHBC}}, {{:kexAB}}, {{:kexBC}}}. |
== Reference == | == Reference == |
Revision as of 14:21, 22 October 2015
The 3-site relaxation dispersion model for the numeric solution (NS) to the Bloch-McConnell equations for MMQ CPMG-type data linearised with kAC = kCA = 0 whereby the simplification R2A0 = R2B0 = R2C0 is assumed.
Contents
Parameters
The NS MMQ 3-site linear model has the parameters {R20, ..., pA, pB, ΔωAB, ΔωBC, ΔωHAB, ΔωHBC, kexAB, kexBC}.
Reference
The references for the NS MMQ 3-site linear model are:
- Korzhnev, D. M., Kloiber, K., Kanelis, V., Tugarinov, V., and Kay, L. E. (2004). Probing slow dynamics in high molecular weight proteins by methyl-TROSY NMR spectroscopy: application to a 723-residue enzyme. J. Am. Chem. Soc., 126(12), 3964-3973. (10.1021/ja039587i).
- Korzhnev, D. M., Kloiber, K., and Kay, L. E. (2004). Multiple-quantum relaxation dispersion NMR spectroscopy probing millisecond time-scale dynamics in proteins: theory and application. J. Am. Chem. Soc., 126(23), 7320-7329. (10.1021/ja049968b).
- Korzhnev, D. M., Neudecker, P., Mittermaier, A., Orekhov, V. Y., and Kay, L. E. (2005). Multiple-site exchange in proteins studied with a suite of six NMR relaxation dispersion experiments: an application to the folding of a Fyn SH3 domain mutant. J. Am. Chem. Soc., 127(44), 15602-15611. (10.1021/ja054550e).
Links
The implementation of the NS MMQ 3-site linear model in relax can be seen in the: