Difference between revisions of "Grep log file"
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== Grep the log file for commands == | == Grep the log file for commands == | ||
First we find which commands relax has performed, and separate into the different fitting models.<br> | First we find which commands relax has performed, and separate into the different fitting models.<br> | ||
| − | We also just make some line space and important points | + | We also just make some line space and important points. |
| + | |||
| + | Then we replace instances of '''relax> ''' with empty, and comment out the model line. | ||
| + | |||
<source lang="bash"> | <source lang="bash"> | ||
set IN=logfile.txt ; | set IN=logfile.txt ; | ||
set OUT=grep_log_to_commands.txt ; | set OUT=grep_log_to_commands.txt ; | ||
egrep -wi --color 'relax>| model -' $IN > $OUT ; | egrep -wi --color 'relax>| model -' $IN > $OUT ; | ||
| − | |||
| − | |||
| − | |||
sed -i "s/relax> //" $OUT ; | sed -i "s/relax> //" $OUT ; | ||
sed -i 's/^- /\n#- /' $OUT ; | sed -i 's/^- /\n#- /' $OUT ; | ||
Revision as of 07:55, 29 August 2013
Grep the log file for commands
First we find which commands relax has performed, and separate into the different fitting models.
We also just make some line space and important points.
Then we replace instances of relax> with empty, and comment out the model line.
set IN=logfile.txt ;
set OUT=grep_log_to_commands.txt ;
egrep -wi --color 'relax>| model -' $IN > $OUT ;
sed -i "s/relax> //" $OUT ;
sed -i 's/^- /\n#- /' $OUT ;
sed -i 's/^minimise(/\nminimise(/' $OUT ;
sed -i 's/^script(/\n#script(/' $OUT ;
sed -i 's/^results.write(/\nresults.write(/' $OUT ;
sed -i 's/^model_selection(/\nmodel_selection(/' $OUT ;
sed -i '0,/spectrum.replicated(/s//\nspectrum.replicated(/' $OUT ;
sed -i '0,/spectrum.read_intensities(/s//\nspectrum.read_intensities(/' $OUT ;
