Trusted, Bureaucrats
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Changes
Changed the dauvergne_protocol LST tags.
* Removed the out of date and useless README file for the HTML version of the user manual.
* Added a BMRB section to the end of the model-free chapter of the user manual.
* Massive expansion of the model-free chapter of the user manual including script and GUI tutorials. The model-free chapter now has step-by-step tutorials for both the prompt/script mode and GUI mode for the new automated model-free protocol (the d'Auvergne protocol)[d'Auvergne and Gooley, 2007][d'Auvergne and Gooley, 20082008b]. This includes a large set of screenshots for the GUI mode.
* Created the User_functions.test_value_set GUI test demonstrating the failure of the value.set user function.
* Modified the dauvergne_protocol sample script[d'Auvergne and Gooley, 2007][d'Auvergne and Gooley, 20082008b] to handle tryptophan indole NE1 data.
* The graphics.fetch_icon() function argument 'format' can now be set to None. This will return the file path without the extension.
* Improvements to the duplicate user manual title finding script.
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* [*d'Auvergne and Gooley, 2007] d'Auvergne, E. J. and Gooley, P. R. (2007). Set theory formulation of the model-free problem and the diffusion seeded model-free paradigm. ''Mol. BioSyst.'', '''3'''(7), 483–494. (DOI: [http://dx.doi.org/10.1039/b702202f 10.1039/b702202f).
* [*d'Auvergne and Gooley, 20082008b] d'Auvergne, E. J. and Gooley, P. R. (2008). Optimisation of NMR dynamic models II. A new methodology for the dual optimisation of the model-free parameters and the Brownian rotational diffusion tensor. ''J. Biomol. NMR'', '''40'''(2), 121-133. (DOI: [http://dx.doi.org/10.1007/s10858-007-9213-3 10.1007/s10858-007-9213-3]).
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