Trusted, Bureaucrats
4,228
edits
Changes
m
Switch to the {{gna task link}} template to remove dead Gna! links.
* Modified the Sequence GUI input element used for the user function list arguments. The first column is now of fixed with when titles are supplied. Previously when supplying titles, the width would be tiny and no text would be visible.
* Added titles for all 3D coordinate user function arguments. This is for the Sequence GUI input element, and affects the [http://www.nmr-relax.com/manual/frame_order_average_position.html frame_order.average_position], [http://www.nmr-relax.com/manual/n_state_model_CoM.html n_state_model.CoM] and [http://www.nmr-relax.com/manual/paramag_centre.html paramag.centre] user functions.
* The compilation of the C modules now respects the user defined environment. This is the patch from Justin (https://{{gna link|url=gna.org/users/jlec) |text=Justin}} attached to [https://gna.org/bugs/?22145 bug #22145]. It has been modified to include a comment and remove a double empty line.
* Bug fix for the compilation of the C modules now respects the user defined environment. The problem was that on Mac OS X (as well as other systems), that these environmental variables were not defined and hence the scons commands would all fail with a KeyError and traceback. Now the keys in the os.environ dictionary are being searched for before they are set.
* Fix for the wxPython link in the installation chapter of the manual. This was pointing to the scipy website for some reason.
* Split system test Relax_disp.test_bug_22146_unpacking_r2a_r2b_cluster up in different tests. A setup function which is: setup_bug_22146_unpacking_r2a_r2b_cluster(self, folder=None, model_analyse=None): And then the tests: test_bug_22146_unpacking_r2a_r2b_cluster_B14 test_bug_22146_unpacking_r2a_r2b_cluster_CR72 test_bug_22146_unpacking_r2a_r2b_cluster_NS_3D test_bug_22146_unpacking_r2a_r2b_cluster_NS_STAR. [https://gna.org/bugs/?22146 Bug #22146 Unpacking of R<sub>2A</sub><sup>0</sup> and R<sub>2B</sub><sup>0</sup> is performed wrong for clustered "full" dispersion models].
* Modified profiling script to get closer to the implementation in relax. An additional test function is setup to figure out how to reshape the numpy arrays in the target function. [https://gna.org/bugs/?22146 Bug #22146 Unpacking of R<sub>2A</sub><sup>0</sup> and R<sub>2B</sub><sup>0</sup> is performed wrong for clustered "full" dispersion models].
* Updated profiling text for [[CR72]] model. Now it is tested for 3 fields. This is related to: [https://{{gna.org/task/index.php?link|7807 |text=Task #7807: Speed-up of dispersion models for Clustered analysis]}}.
* Added searching for environment variable PYTHON_INCLUDE_DIR if Python.h is not found in standard Python library. This can be very handsome, if one has a Python virtual environment for multiple users. This relates to the wiki page: http://wiki.nmr-relax.com/Epd_canopy.
* The [http://www.nmr-relax.com/api/3.2/lib.compat-module.html#norm lib.compat.norm() replacement function] for numpy.linalg.norm() now handles no axis argument. This is to allow the function to be used in all cases where numpy.linalg.norm() is used, while providing compatibility with the axis argument and all numpy versions.
* [http://wiki.nmr-relax.com/Relax_3.2.3 Official release notes on the relax wiki].
* [https://{{gna link|url=gna.org/forum/forum.php?forum_id=2469 |text=Gna! news item]}}.
* [http://article.gmane.org/gmane.science.nmr.relax.announce/57 Gmane mailing list archive].
* [http://www.mail-archive.com/relax-announce%40gna.org/msg00049.html The Mail Archive].