Changes

mkdir peak_lists foreach line ("`tail -n+2 exp_parameters.txt`") set argv=( $line ) set DIRN=$1 set I=$2 set deltadof2=$3 set dpwr2slock=$4 set ncyc=$5 set trim=$6 set ss=$7 set sfrq=$8 echo $I set FNAME=${I}_${deltadof2}_${dpwr2slock}_${ncyc}.ser cd $DIRN seriesTab -in ../peaks_list.tab -out peaks_list_max_standard${FNAME}_max_standard.ser -list ft2_files../ft2_file.ls -max seriesTab -in ../peaks_list.tab -out peaks_list_max_dx1_dy1${FNAME}_max_dx1_dy1.ser -list ft2_files../ft2_file.ls -max -dx 1 -dy 1</source> OR make the sum in a box:<source lang="bash"> seriesTab -in ../peaks_list.tab -out peaks_list_sum_dx1_dy1${FNAME}_sum_dx1_dy1.ser -list ft2_files../ft2_file.ls -sum -dx 1 -dy 1 cp ${FNAME}_max_standard.ser ../peak_lists cd ..end