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Fixes for the d'Auvergne model-free protocol references.
* All spins can be looped over simply by using the spin_loop() generator function.
* Molecules, residues, and spins are now selected by the new syntax of the spin identification string.
* Improvements and simplifications to the 'full_analysis.py' script [d'Auvergne and Gooley, 2882007][d'Auvergne and Gooley, 2008] with all user modifiable variables shifted to the top of the script as global variables.* Automatic looping until convergence has been added to the 'full_analysis.py' [d'Auvergne and Gooley, 2882007][d'Auvergne and Gooley, 2008] script to further simplify usage.
* Setting the type of nucleus is now done with the [http://www.nmr-relax.com/manual/value_set.html value.set user function] on a spin-by-spin basis. This is important for RNA, small molecules and protein analyses with Ca and N data.
* A new analysis type, the N-state model for interpreting domain motions using RDC and PCS data, is now supported.
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* [*d'Auvergne and Gooley, 2007] d'Auvergne, E. J. and Gooley, P. R. (2007). Set theory formulation of the model-free problem and the diffusion seeded model-free paradigm. ''Mol. BioSyst.'', '''3'''(7), 483–494. (DOI: [http://dx.doi.org/10.1039/b702202f 10.1039/b702202f).
* [*d'Auvergne and Gooley, 2008] d'Auvergne, E. J. and Gooley, P. R. (2008). Optimisation of NMR dynamic models II. A new methodology for the dual optimisation of the model-free parameters and the Brownian rotational diffusion tensor. ''J. Biomol. NMR'', '''40'''(2), 121-133. (DOI: [http://dx.doi.org/10.1007/s10858-007-9213-3 10.1007/s10858-007-9213-3]).
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