Difference between revisions of "NS R1rho 3-site linear"

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The 3-site exchange relaxation dispersion model for the numeric solution (NS) to the Bloch-McConnell equations for [[R1rho-type data]], linearised with $k_{AC} = k_{CA} = 0$.  This model is labelled as '''NS R1rho 3-site linear''' in relax.
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The 3-site exchange relaxation dispersion model for the numeric solution (NS) to the Bloch-McConnell equations for [[R1rho-type data]], linearised with {{:kAC}} = {{:kCA}} = 0.  This model is labelled as '''NS R1rho 3-site linear''' in [[Relaxation dispersion citation for relax|relax]].
  
 
== Parameters ==
 
== Parameters ==
  
The NS R1rho 3-site linear model has the parameters {$R_{1\rho}'$, $...$, $p_A$, $p_B$, $\Delta\omega_{AB}$, $\Delta\omega_{BC}$, $k_{ex}^{AB}$, $k_{ex}^{BC}$}.
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The NS R1rho 3-site linear model has the parameters {{{:R1rhoprime}}, ..., {{:pA}}, {{:pB}}, {{:DeltaomegaAB}}, {{:DeltaomegaBC}}, {{:kexAB}}, {{:kexBC}}}.
  
 
== Reference ==
 
== Reference ==
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The references for the NS R1rho 3-site linear model are:
 
The references for the NS R1rho 3-site linear model are:
  
* Korzhnev, D. M., Orekhov, V. Y., and Kay, L. E. (2005b). Off-resonance R(1rho) NMR studies of exchange dynamics in proteins with low spin-lock fields: an application to a Fyn SH3 domain. ''J. Am. Chem. Soc.'', '''127'''(2), 713-721. ([http://dx.doi.org/10.1021/ja0446855 10.1021/ja0446855]).
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* {{#lst:Citations|Korzhnev05b}}
* Palmer, 3rd, A. G. and Massi, F. (2006). Characterization of the dynamics of biomacromolecules using rotating-frame spin relaxation NMR spectroscopy. ''Chem. Rev.'', '''106'''(5), 1700-1719. ([http://dx.doi.org/10.1021/cr0404287 10.1021/cr0404287]).
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* {{#lst:Citations|PalmerMassi06}}
  
 
== Links ==
 
== Links ==
  
The implementation of the NS R1rho 3-site linear model in relax can be seen in the:
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The [[Relaxation dispersion citation for relax|implementation of the NS R1rho 3-site linear model in relax]] can be seen in the:
* [http://www.nmr-relax.com/manual/NS_3_site_linear_R1_model.html relax manual],  
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* [http://www.nmr-relax.com/manual/The_NS_3_site_linear_R1_rho_model.html relax manual],  
 
* [http://www.nmr-relax.com/api/3.1/lib.dispersion.ns_r1rho_3site-module.html API documentation],
 
* [http://www.nmr-relax.com/api/3.1/lib.dispersion.ns_r1rho_3site-module.html API documentation],
 
* [http://www.nmr-relax.com/analyses/relaxation_dispersion.html#NS_R1rho_3-site_linear relaxation dispersion page of the relax website].
 
* [http://www.nmr-relax.com/analyses/relaxation_dispersion.html#NS_R1rho_3-site_linear relaxation dispersion page of the relax website].
  
 
== See also ==
 
== See also ==
[[Category:Relaxation_dispersion]]
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[[Category:Models]]
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[[Category:Dispersion models]]
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[[Category:Relaxation dispersion analysis]]

Latest revision as of 16:47, 6 November 2015

The 3-site exchange relaxation dispersion model for the numeric solution (NS) to the Bloch-McConnell equations for R1rho-type data, linearised with kAC = kCA = 0. This model is labelled as NS R1rho 3-site linear in relax.

Parameters

The NS R1rho 3-site linear model has the parameters {R', ..., pA, pB, ΔωAB, ΔωBC, kexAB, kexBC}.

Reference

The references for the NS R1rho 3-site linear model are:

  • Korzhnev, D. M., Orekhov, V. Y., and Kay, L. E. (2005). Off-resonance R(1rho) NMR studies of exchange dynamics in proteins with low spin-lock fields: an application to a Fyn SH3 domain. J. Am. Chem. Soc., 127(2), 713-721. (DOI: 10.1021/ja0446855)
  • Palmer, 3rd, A. G. and Massi, F. (2006). Characterization of the dynamics of biomacromolecules using rotating-frame spin relaxation NMR spectroscopy. Chem. Rev., 106(5), 1700-1719. (DOI: 10.1021/cr0404287)

Links

The implementation of the NS R1rho 3-site linear model in relax can be seen in the:

See also