Trusted, Bureaucrats
4,223
edits
Changes
m
{{lowercase title}}
{{infobox relax release| version = 2.2.1| prev = 2.2.0| next = 2.2.2| type = Quick bugfix| date = 01 February 2013| manual = yes}} == Description ==
<section begin=description/>
<section end=description/>
== Download ==
<section begin=download/>
<section end=download/>
== CHANGES file ==
<section begin=metadata/>
<section end=metadata/>
=== Features ===
<section begin=features/>
<section end=features/>
=== Changes ===
<section begin=changes/>
<section end=changes/>
=== Bugfixes ===
<section begin=bugfixes/>
* Fix for the bug reported as the [https://gna.org/support/?2998 support request #2998]. CONECT records pointing to non-existent atoms can now be handled.
* Fix for [https://gna.org/bugs/?20469 bug #20469, the failure in reading X-ray PDB files using the ScientificPython parser]. The ScientificPython Geometry.Transformation module is now distributed with relax. Some linear algebra imports in the Geometry.TensorModule in newly used code paths have been fixed as well.
* Fix for [https://gna.org/bugs/?20470 bug #20470]. The [http://www.nmr-relax.com/manual/structure.read_pdb.html structure.read_pdb user function ] now accepts the alt_loc argument for specifying the alternate location indicator to read. This is used by the internal PDB reader. The bug was caught by the Structure.test_bug_20470_alternate_location_indicator system test.
* Fix for [https://gna.org/bugs/?20471 bug #20471 - the is_empty() AttributeError when reading BMRB files]. The problem was that the data pipe is_empty() method was not handling structural data correctly. The is_empty() method now belongs to the MolContainer objects rather than cdp.structure, and the object cdp.structure is not always present.
<section end=bugfixes/>
== Links ==
<section begin=links/>
For reference, the following links are also part of the announcement for this release:
* [http://wiki.nmr-relax.com/Relax_2.2.1 Official release notes]
* [https://{{gna link|url=gna.org/forum/forum.php?forum_id=2376 |text=Gna! news item]}}
* [http://article.gmane.org/gmane.science.nmr.relax.announce/38 Gmane]
* [http://www.mail-archive.com/relax-announce%40gna.org/msg00034.html Mail Archive]
<section end=links/>
== Announcements ==
{{:relax release announcements}}
== See also ==
* [http://www.nmr-relax.com/api/2.2/ The relax 2.2 API documentation]
{{:relax release see also}}