Trusted, Bureaucrats
4,228
edits
Changes
Jump to navigation
Jump to search
{||+100 single spins analysis (times in seconds): !Model![[relax 3.2.3]] timings![[relax 3.3.0]] timings!Speed change|-|[[No Rex]]: |0.824+/-0.017 -> |0.269+/-0.016, |3.068x faster. |-|[[LM63]]: |1.616+/-0.017 -> |0.749+/-0.008, |2.157x faster. |-|[[LM63 3-site]]: |3.218+/-0.039 -> |0.996+/-0.013, |3.230x faster. |-|[[CR72]]: |2.639+/-0.042 -> |1.536+/-0.019, |1.718x faster. |-|[[CR72 full]]: |2.808+/-0.027 -> |1.689+/-0.075, |1.663x faster. |-|[[IT99]]: |1.838+/-0.032 -> |0.868+/-0.011, |2.118x faster. |-|[[TSMFK01]]: |1.643+/-0.033 -> |0.718+/-0.011, |2.289x faster. |-|[[B14]]: |5.841+/-0.050 -> |3.747+/-0.044, |1.559x faster. |-|[[B14 full]]: |5.942+/-0.053 -> |3.841+/-0.044, |1.547x faster. |-|[[NS CPMG 2-site expanded]]: |8.309+/-0.066 -> |4.070+/-0.073, |2.041x faster. |-|[[NS CPMG 2-site 3D]]: |245.180+/-2.162 -> |45.410+/-0.399, |5.399x faster. |-|[[NS CPMG 2-site 3D full]]: |237.217+/-2.582 -> |45.177+/-0.415, |5.251x faster. |-|[[NS CPMG 2-site star]]: |183.423+/-1.966 -> |36.542+/-0.451, |5.020x faster. |-|[[NS CPMG 2-site star full]]: |183.622+/-1.326 -> |36.788+/-0.343, |4.991x faster. |-|[[MMQ CR72]]: |5.920+/-0.105 -> |4.078+/-0.105, |1.452x faster. |-|[[NS MMQ 2-site]]: |363.659+/-2.610 -> |82.588+/-1.197, |4.403x faster. |-|[[NS MMQ 3-site linear]]: |386.798+/-4.480 -> |92.060+/-0.754, |4.202x faster. |-|[[NS MMQ 3-site]]: |391.195+/-3.442 -> |93.025+/-0.829, |4.205x faster. |-|[[M61]]: |1.576+/-0.022 -> |0.862+/-0.009, |1.828x faster. |-|[[DPL94]]: |22.794+/-0.517 -> |1.101+/-0.008, |20.705x faster. |-|[[TP02]]: |19.892+/-0.363 -> |1.232+/-0.007, |16.152x faster. |-|[[TAP03]]: |31.701+/-0.378 -> |1.936+/-0.017, |16.377x faster. |-|[[MP05]]: |24.918+/-0.572 -> |1.428+/-0.015, |17.454x faster. |-|[[NS R1rho 2-site]]: |244.604+/-2.493 -> |35.125+/-0.202, |6.964x faster. |-|[[NS R1rho 3-site linear]]: |287.181+/-2.939 -> |68.245+/-0.536, |4.208x faster. |-|[[NS R1rho 3-site]]: |290.486+/-3.614 -> |70.449+/-0.686, |4.123x faster.|}
{||+Cluster of 100 spins analysis (times in seconds): |-|[[No Rex]]: |0.818+/-0.016 -> |0.008+/-0.001, |97.333x faster. |-|[[LM63]]: |1.593+/-0.018 -> |0.037+/-0.000, |43.401x faster. |-|[[LM63 3-site]]: |3.134+/-0.039 -> |0.067+/-0.001, |47.128x faster. |-|[[CR72]]: |2.610+/-0.047 -> |0.115+/-0.001, |22.732x faster. |-|[[CR72 full]]: |2.679+/-0.034 -> |0.122+/-0.005, |22.017x faster. |-|[[IT99]]: |1.807+/-0.025 -> |0.063+/-0.001, |28.687x faster. |-|[[TSMFK01]]: |1.636+/-0.036 -> |0.039+/-0.001, |42.170x faster. |-|[[B14]]: |5.799+/-0.054 -> |0.488+/-0.010, |11.879x faster. |-|[[B14 full]]: |5.803+/-0.043 -> |0.484+/-0.006, |11.990x faster. |-|[[NS CPMG 2-site expanded]]: |8.326+/-0.081 -> |0.685+/-0.012, |12.160x faster. |-|[[NS CPMG 2-site 3D]]: |244.869+/-2.382 -> |41.217+/-0.467, |5.941x faster. |-|[[NS CPMG 2-site 3D full]]: |236.760+/-2.575 -> |41.001+/-0.466, |5.775x faster. |-|[[NS CPMG 2-site star]]: |183.786+/-2.089 -> |30.896+/-0.417, |5.948x faster. |-|[[NS CPMG 2-site star full]]: |183.243+/-1.615 -> |30.898+/-0.343, |5.931x faster. |-|[[MMQ CR72]]: |5.978+/-0.094 -> |0.847+/-0.007, |7.061x faster. |-|[[NS MMQ 2-site]]: |363.138+/-3.041 -> |75.906+/-0.845, |4.784x faster. |-|[[NS MMQ 3-site linear]]: |384.978+/-5.402 -> |83.703+/-0.773, |4.599x faster. |-|[[NS MMQ 3-site]]: |388.557+/-3.261 -> |84.702+/-0.762, |4.587x faster. |-|[[M61]]: |1.555+/-0.021 -> |0.034+/-0.001, |45.335x faster. |-|[[DPL94]]: |22.837+/-0.494 -> |0.140+/-0.002, |163.004x faster. |-|[[TP02]]: |19.958+/-0.407 -> |0.167+/-0.002, |119.222x faster. |-|[[TAP03]]: |31.698+/-0.424 -> |0.287+/-0.003, |110.484x faster. |-|[[MP05]]: |25.009+/-0.683 -> |0.187+/-0.007, |133.953x faster. |-|[[NS R1rho 2-site]]: |242.096+/-1.483 -> |32.043+/-0.157, |7.555x faster. |-|[[NS R1rho 3-site linear]]: |280.778+/-2.589 -> |62.866+/-0.616, |4.466x faster. |-|[[NS R1rho 3-site]]: |282.192+/-5.195 -> |63.174+/-0.816, |4.467x faster.|}
→Description: Conversion to a proper Mediawiki table.
To demonstrate the huge speeds ups in the relaxation dispersion analysis, the following table compares the speed of dispersion models in [[relax 3.2.3]] compared to the new 3.3.0 version:
Full details of this comparison can be seen in the test_suite/shared_data/dispersion/profiling directory. For information about each of these models, please see the links: http://wiki.nmr-relax.com/No_Rex, http://wiki.nmr-relax.com/LM63, http://wiki.nmr-relax.com/LM63_3-site, http://wiki.nmr-relax.com/CR72, http://wiki.nmr-relax.com/CR72_full, http://wiki.nmr-relax.com/IT99, http://wiki.nmr-relax.com/TSMFK01, http://wiki.nmr-relax.com/B14, http://wiki.nmr-relax.com/B14_full, http://wiki.nmr-relax.com/NS_CPMG_2-site_expanded, http://wiki.nmr-relax.com/NS_CPMG_2-site_3D, http://wiki.nmr-relax.com/NS_CPMG_2-site_3D_full, http://wiki.nmr-relax.com/NS_CPMG_2-site_star, http://wiki.nmr-relax.com/NS_CPMG_2-site_star_full, http://wiki.nmr-relax.com/MMQ_CR72, http://wiki.nmr-relax.com/NS_MMQ_2-site, http://wiki.nmr-relax.com/NS_MMQ_3-site_linear, http://wiki.nmr-relax.com/NS_MMQ_3-site, http://wiki.nmr-relax.com/M61, http://wiki.nmr-relax.com/DPL94, http://wiki.nmr-relax.com/TP02, http://wiki.nmr-relax.com/TAP03, http://wiki.nmr-relax.com/MP05, http://wiki.nmr-relax.com/NS_R1rho_2-site, http://wiki.nmr-relax.com/NS_R1rho_3-site_linear, http://wiki.nmr-relax.com/NS_R1rho_3-site.
