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Created page with "== Background == This is a tutorial for Lau and Kaare in SBiNLab, and hopefully others. To get inspiration of example scripts files and '''see''' how the protocol is performe..."
== Background ==
This is a tutorial for Lau and Kaare in SBiNLab, and hopefully others.
To get inspiration of example scripts files and '''see''' how the protocol is performed, have a look here:
* nmr-relax-code/test_suite/system_tests/scripts/model_free/dauvergne_protocol.py
* nmr-relax-code/auto_analyses/dauvergne_protocol.py
== Scripts ==
To get the protocol to work, we need to
* Load a PDB structure
* Assign the "data structure" in relax through spin-assignments
* Assign necessary "information" as isotope information to each spin-assignment
* Read "R1, R2 and NOE" for different magnet field strengths
* Calculate some properties
* Check the data
* Run the protocol
To work most efficiently, it is important to perform each step 1 by 1,
and closely inspect the log for any errors.
For similar tutorial, have a look at [Tutorial_for_model-free_analysis_sam_mahdi]
=== 01 - Test load of data ===
== See also ==
[[Category:Tutorials]]
[[Category:Model-free_analysis]]
This is a tutorial for Lau and Kaare in SBiNLab, and hopefully others.
To get inspiration of example scripts files and '''see''' how the protocol is performed, have a look here:
* nmr-relax-code/test_suite/system_tests/scripts/model_free/dauvergne_protocol.py
* nmr-relax-code/auto_analyses/dauvergne_protocol.py
== Scripts ==
To get the protocol to work, we need to
* Load a PDB structure
* Assign the "data structure" in relax through spin-assignments
* Assign necessary "information" as isotope information to each spin-assignment
* Read "R1, R2 and NOE" for different magnet field strengths
* Calculate some properties
* Check the data
* Run the protocol
To work most efficiently, it is important to perform each step 1 by 1,
and closely inspect the log for any errors.
For similar tutorial, have a look at [Tutorial_for_model-free_analysis_sam_mahdi]
=== 01 - Test load of data ===
== See also ==
[[Category:Tutorials]]
[[Category:Model-free_analysis]]
