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Tutorial for model free SBiNLab

996 bytes added, 14:15, 16 October 2017
== 11_read_data_GUI_inspect.py - Read data GUI inspect ==
This will read the data and save as a state.
 
The GUI can be a good place to inspect the setup and files.
* Right click on pipe, and select "Associate with a new auto-analysis"
== 12_Model_I_local_tm.py - Only run local_tm ==
Now we only run '''Model 1'''.
 
* DIFF_MODEL = ['local_tm']
* GRID_INC = 11 # This is the standard
* MC_NUM = 0 # This has no influence in Model 1-5
* MAX_ITER = 20 # Stop if it has not converged in 20 rounds
 
See content of:
[https://github.com/tlinnet/relax_modelfree_scripts/blob/master/12_Model_I_local_tm.py 12_Model_I_local_tm.py]
 
We use [http://www.dayid.org/comp/tm.html tmux] to make a terminal-session, we can get back to,
if our own terminal connection get closed.
 
Run with
<source lang="bash">
# Make terminal-session
tmux new -s m1
 
relax 12_Model_I_local_tm.py -t 12_Model_I_local_tm.log
</source>
 
You can then in another terminal follow the logfile by
<source lang="bash">
less +F 12_Model_I_local_tm.log
</source>
 
* To scroll up and down, use keyboard: '''Ctrl+c'''
* To return to follow mode, use keyboard: '''Shift+f'''
* To exit, use keyboard: '''Ctrl+c''' and then: '''q'''
= To run on Haddock =
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