Search results

Jump to navigation Jump to search
  • ...models, fixes for a system test on 32-bit GNU/Linux, and a fix for running scripts with certain versions of Python. * Created a sample script to create a CSV file of model-free results for reading into spreadsh
    3 KB (428 words) - 12:42, 14 October 2020
  • ...sub>, or the NOE) has been fixed as well as the out of date generate_ri.py sample script.
    1 KB (182 words) - 21:43, 8 October 2020
  • * Copyright statements added to the sample scripts for identifying the author and date of the script.
    3 KB (350 words) - 22:10, 13 October 2020
  • ...directory and modified (using the <code>svn cp</code> command). Once the scripts are functional, they can be copied and modified for the truncated data (aga * Copy the full analysis script to <code>test_suite/system_tests/scripts/relax_disp/</code> with an appropriate name (always using the <code>svn cp<
    20 KB (3,227 words) - 20:09, 8 October 2020
  • * Fixes for the relax_curve_diff.py and latex_mf_table.py sample scripts (identified by the relax data store abstraction). ...reading of the results file in the 'final' stage of the 'full_analysis.py' sample script is fixed ({{gna bug link|12409}}).
    5 KB (698 words) - 12:49, 14 October 2020
  • * The <sup>15</sup>N CSA values in the sample scripts are now all -172 ppm. * The 'angles.py' sample script no longer fails when residue specific relaxation data is missing (co
    5 KB (779 words) - 12:22, 16 October 2020
  • * Added elimination of Monte Carlo simulations to the sample scripts. * The 'full_analysis.py' sample script now only searches over 6<sup>6</sup> rather than 11<sup>6</sup> grid
    8 KB (1,147 words) - 12:25, 16 October 2020
  • == Get the process helper scripts == ...en from the relax disp manual, section 10.6.1 Dispersion script mode - the sample script
    10 KB (1,636 words) - 11:51, 18 November 2015
  • * Added two sample scripts for determining the populations of an ensemble of small molecules. This us * Scripts can now be run again under Python versions 2.4 or lower (by avoiding the ru
    24 KB (3,891 words) - 21:17, 16 October 2020
  • ...if all issues are reported. Note that this is a development line and that scripts written for version [[relax 1.3.1|1.3.1]] may not work automatically in fut * The inclusion of headers in the sample scripts to identify the author and age of the script.
    11 KB (1,607 words) - 12:52, 14 October 2020
  • ...ease do not expect either the backwards or forwards compatibility of relax scripts written for the 1.3 relax versions. * Added a sample script for the creation of the PDB representation of the diffusion tensor.
    6 KB (957 words) - 12:28, 16 October 2020
  • * Converted the reduced J(&omega;) mapping sample script to the relax 1.3 design to make it functional. * Addition of a sample script for the determination the relative stereochemistry of organic molecu
    16 KB (2,425 words) - 12:46, 14 October 2020
  • * Fix for the latex_mf_table.py sample script ([https://gna.org/bugs/?13163 bug #13163]). ...high te values (>200 ns) were not being eliminated in the full_analysis.py sample script ([https://gna.org/bugs/?13259 bug #13259]).
    16 KB (2,542 words) - 12:47, 14 October 2020
  • scripts mkdir peak_lists spectrometer_data scripts
    31 KB (4,876 words) - 12:12, 27 October 2017
  • * Setup for testing the sample_scripts/relax_disp/R1rho_analysis.py sample script. The script was copied into the test_suite/shared_data/dispersion/r ...relaxation dispersion auto-analysis options are now exposed by the sample scripts. This included the pre_run_dir argument for specifying a directory of resu
    50 KB (8,249 words) - 10:36, 15 October 2020
  • * A new sample script for loading a model-free results file and back-calculating relaxatio ...cate_title_check replicate_title_check target] has been added to the scons scripts. This calls the <code>find()</code> method of the replicate LaTeX title fi
    28 KB (4,484 words) - 20:27, 8 October 2020
  • | keywords = Bash completion, Speed, Sample scripts, Manual, Docker, Travis-CI, User function argument checking ...the GUI and in the execution of many relax user functions, improved sample scripts, significant relax manual updates, support for newer NMRPipe SeriesTab file
    89 KB (14,190 words) - 09:46, 8 March 2019
  • Maybe a combination of GUI and scripts? === Copy sample script ===
    41 KB (6,607 words) - 09:59, 6 October 2020
  • == Sample data to try dx == # See sample scripts
    29 KB (4,405 words) - 19:44, 16 October 2020
  • * Added the ability to skip scripts in the package __all__ list unit test checks. ...ual/value_write.html value.write user function]s to the J(&omega;) mapping sample script.
    13 KB (1,995 words) - 12:29, 14 October 2020
  • ...ated the journal reference for the published lactose conformational search scripts. * Shifted some of the sample scripts into the analysis specific sub-directories.
    32 KB (5,221 words) - 11:41, 14 October 2020
  • * Syntax error fix for one of the unused scripts in the relax test suite shared data directories. This problem was encounte * Updates to the sample scripts for the [http://www.nmr-relax.com/manual/spectrum_read_intensities.html spe
    23 KB (3,744 words) - 09:06, 16 October 2020
  • ....write user function not being able to write ref/sat plots as described in sample script noe.py]. Instead of trying to produce the 'ref.agr' and 'sat.agr' f ....write user function not being able to write ref/sat plots as described in sample script noe.py]. Instead of trying to produce the 'ref.agr' and 'sat.agr' f
    162 KB (26,041 words) - 13:58, 16 October 2020
  • * Updated the diffusion tensor minimisation sample script as the code is very old and useless. ...nts as well. This new flag is for backwards compatibility - it allows old scripts to operate as before while enabling the new functionality.
    32 KB (5,334 words) - 11:37, 14 October 2020
  • * Renamed test scripts and files for producing surface &chi;<sup>2</sup> plots. * Renamed sample scripts making surface maps.
    57 KB (9,377 words) - 10:35, 16 October 2020
  • ...and uncommented a few lines of code. Of course, this won't work until the sample data has been introduced and the right names for the different files be inp * Added details to the readme file and changed the directory name where the sample data is located. The directory is now named 'dataset_1-a'. This contains
    319 KB (52,401 words) - 13:30, 16 October 2020
  • * The GUI test suite has been significantly expanded. The system test relax scripts can now be used as GUI tests - the user functions are executed through the * The dauvergne_protocol sample script[d'Auvergne and Gooley, 2007][d'Auvergne and Gooley, 2008b] initial p
    111 KB (18,476 words) - 11:45, 14 October 2020
  • ...atest speed ups. There are also improvements for helping to upgrade relax scripts to newer relax versions. The numdifftools package is now bundled with rela ...anges from [[relax 1.0.1]] to [[relax 3.3.1|3.3.1]] to help with upgrading scripts to newer relax versions.
    79 KB (12,277 words) - 15:04, 16 October 2020
  • ...This is in the base script used by all scripts in test_suite/system_tests/scripts/frame_order/cam/. ...This is in the base script used by all scripts in test_suite/system_tests/scripts/frame_order/cam/. The translation vector coordinates are now set, as well
    270 KB (43,886 words) - 20:40, 8 October 2020
  • ...of interatomic distance, angle or parallax shift fluctuations, measured as sample standard deviations, between different molecules. * Updated the gnuplot scripts to be executable. These are the scripts created by the [http://www.nmr-relax.com/api/3.3/lib.plotting.gnuplot-modul
    101 KB (15,433 words) - 13:37, 16 October 2020
  • .../minimise_execute.html minimise.execute] respectively. Please update your scripts appropriately. A new relax feature is that old user function calls are det ...ames of the old and new user functions. This is for help in upgrading old scripts and is currently for the calc(), grid_search(), and minimise() user functio
    362 KB (56,434 words) - 20:34, 16 October 2020